PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.298
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 209aa    MW: 23995.9 Da    PI: 5.3831
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.298genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1744.3e-5461331128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 
                                   lppGfrFhPtdeelv++yLk+kv+g k+el ++i+evd+yk+ePw+L  k  + +++ +wyfF +rd+ky++g r+nrat+
  evm.model.AsparagusV1_10.298   6 LPPGFRFHPTDEELVNYYLKRKVHGLKIEL-DIIPEVDLYKCEPWELSdKsFLPSKDPDWYFFGPRDRKYPNGFRTNRATQ 85 
                                   79****************************.99**************85335556788*********************** PP

                           NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +gyWk+tgkd++v + +++++g+kktLv+y+grap+g +tdWvmheyr+
  evm.model.AsparagusV1_10.298  86 AGYWKSTGKDRRVRC-QNRAIGMKKTLVYYRGRAPRGIRTDWVMHEYRI 133
                                   ***************.8999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MAPVGLPPGF RFHPTDEELV NYYLKRKVHG LKIELDIIPE VDLYKCEPWE LSDKSFLPSK  60
DPDWYFFGPR DRKYPNGFRT NRATQAGYWK STGKDRRVRC QNRAIGMKKT LVYYRGRAPR  120
GIRTDWVMHE YRIDDKECED NTMGMQPTTS CSAVDQHETM SPDIVPLRSS PCVDDEEDKG  180
EDDGWMQFIA DYGDDSTPHP SSCVASAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-93NAC family protein