PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.449
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 235aa    MW: 26795.4 Da    PI: 8.4716
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.449genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.45.3e-4471311128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrF+Ptdeelvv+yLk+k+++++l++  +i+e+ + +++PwdLp ++   e e yfF  ++ +y++g+r+nrat+sg
  evm.model.AsparagusV1_10.449   7 LPPGFRFRPTDEELVVQYLKRKATSSPLPA-AIIPEIVLGNHDPWDLPGCF---EGEKYFFNLQEARYRNGNRSNRATRSG 83 
                                   79****************************.88***************776...4589*********************** PP

                           NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatg+++++l++ ++  vg+kk+L+f++ r p g +t+W+mheyrl
  evm.model.AsparagusV1_10.449  84 YWKATGREQAILCSkRNVIVGMKKVLAFHQVRYPGGARTHWFMHEYRL 131
                                   ***********99846667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEKLTRLPPG FRFRPTDEEL VVQYLKRKAT SSPLPAAIIP EIVLGNHDPW DLPGCFEGEK  60
YFFNLQEARY RNGNRSNRAT RSGYWKATGR EQAILCSKRN VIVGMKKVLA FHQVRYPGGA  120
RTHWFMHEYR LVDHEIMAST HIKNPTKSPL FQDHNWVVCH IFVKKKASRI NEDMSQYYDN  180
LQARNNDVVF VEMNHMMGGD SGSQSPTSSC ITDLSDEECS KVEEANSNLI ASSP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.15e-64NAC family protein