PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.762
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 278aa    MW: 30762.3 Da    PI: 5.1903
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.762genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-124589347
                                  SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  +WT+eE+  ++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
  evm.model.AsparagusV1_10.762 45 PWTEEEHRMFLLGLQKLGKGDWRGIARNFVISRTPTQVASHAQKY 89
                                  8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDRFERARVW GTSLTTPGDA ADGYASEDFV QGSSSSCRER KRGVPWTEEE HRMFLLGLQK  60
LGKGDWRGIA RNFVISRTPT QVASHAQKYF IRQTNMNRRK RRSSLFDIVP NEAAEAQFFP  120
MNGQELEVHG KVPLPAPSTV DEECESMDSN NSDGEAAVQN PEASQCTYPK QETPQCPYPV  180
MYPAFFTPVF PYPLPLWANY SAETSDEQTH EVVKPTPVHS KAPMNVDELL GISKLSIGES  240
QLTQNLLGDS NRQSAFQANP PSSGSAMKSS TDPIQAI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-89MYB_related family protein