PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.863
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 233aa    MW: 27048.9 Da    PI: 8.21
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.863genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.69.2e-31541802126
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratk. 79 
                                   p Gf+F Ptdeel  +yL  +  ++ ++  + ++++ +y++ P+ L +k+++   + +wyfF++r+ ky++g+r+ r t+ 
  evm.model.AsparagusV1_10.863  54 PSGFHFAPTDEELAFRYLLSRKLRNLVPY-DGVRDAIVYETRPEILVQKHEKwaADGKWYFFTTREPKYPKGSRPARHTHd 133
                                   78****************99988888899.78**************75444333566********************9886 PP

                           NAM  80 .sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126
                                    +gyWkatg+dk++ +  g+   l+k Lv+y g+ p+g++t+Wvm e 
  evm.model.AsparagusV1_10.863 134 gAGYWKATGSDKHMQC-PGNYFALRKLLVYYLGNYPHGTRTKWVMGEI 180
                                   7899************.8899************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNESKRKGKA PMMFEEILDM KGPKWCTHPI ELPVGCNIQD LRRLERRTEP LKPPSGFHFA  60
PTDEELAFRY LLSRKLRNLV PYDGVRDAIV YETRPEILVQ KHEKWAADGK WYFFTTREPK  120
YPKGSRPARH THDGAGYWKA TGSDKHMQCP GNYFALRKLL VYYLGNYPHG TRTKWVMGEI  180
ILVDNNKEPN YNLALCIITK RQEEEDVENG EQASDQLEHN QEVDKMGCLL SH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52890.13e-28NAC family protein