PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.486
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 413aa    MW: 46285.5 Da    PI: 5.0027
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.486genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.43.5e-205914852128
                                   NAM  52 kaeekewyfFskrdkkyatgkrknra............tksgyWkatgkdkevlskkgelvglkktLvfy..k 110
                                           k + +  +fF+++ k+y+tg+rk+r+              + +W++tgk+k+v+  +g ++g+kk++v+y   
  evm.model.AsparagusV1_Unassigned.486  59 KMDGSVSHFFHRTFKAYNTGTRKRRKiqqsddndtegqGGDVRWHKTGKTKPVII-DGVHIGCKKIMVLYssL 130
                                           3455678******************868888888654433678************.99************553 PP

                                   NAM 111 grapkgektdWvmheyrl 128
                                           ++ +k+ekt+Wvmh+y+l
  evm.model.AsparagusV1_Unassigned.486 131 KKGEKPEKTNWVMHQYHL 148
                                           4777778*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MTGTSWLIDS KRIATKIKYA AESVDVSKVK WISNPTKACP RCNHIIDNSD VVHEWPGVKM  60
DGSVSHFFHR TFKAYNTGTR KRRKIQQSDD NDTEGQGGDV RWHKTGKTKP VIIDGVHIGC  120
KKIMVLYSSL KKGEKPEKTN WVMHQYHLGT GEDEKDGEFV VSKLFYQQQQ LLKPSENNKS  180
ELQNLAMMVE TVDAEAVVAA TKSEEENDVA LHHELVPRLA VEEHHEPAPS LATVPQHFAH  240
DEQRTGQASS NQVVMDNGIV TNESGVAQNI GQEKTDNTIN TEQEKTDDQN IENHINTGEE  300
SKWWEGESQY LLDSQQLAEG IALCDEFLQS QSSCGGDVEE AKRMRPCLLA EYARKGGVDD  360
FKKDLEECQT LGLNHLVVTD QKKNATDFEL LETPSDMRLS QLEFGSQDSF LA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
180109RKRRKIQQSDDNDTEGQGGDVRWHKTGKTK
281110RKRRKIQQSDDNDTEGQGGDVRWHKTGKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.16e-85NAC family protein