PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.71
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 159aa    MW: 18760.1 Da    PI: 9.0072
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.71genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-13550248
                                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                      Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                         g W   Ede+l+ a  ++G+++W++I++ +  ++++kqck rw+ +l
  evm.model.AsparagusV1_Unassigned.71  5 GVWKNTEDEILKAAAMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 50
                                         78*****************************.************986 PP
2Myb_DNA-binding33.68.9e-1199142248
                                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                            WT eEde+l  + k++++  W+ Ia  +g  Rt++qc +r+ k+l
  evm.model.AsparagusV1_Unassigned.71  99 TEWTREEDEKLFYLAKLMPTQ-WRNIAPIVG--RTPYQCLERYEKLL 142
                                          68*****************99.********8..**********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MIKGGVWKNT EDEILKAAAM KYGKNQWARI SSLLVRKSAK QCKARWYEWL DPSIKIKTAF  60
LRFHLVLCYY CLFSVIFRGK ILIFIGIVEL CLKCWLEKTE WTREEDEKLF YLAKLMPTQW  120
RNIAPIVGRT PYQCLERYEK LLYAVCAKDE NYDANDDP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.13e-67MYB family protein