PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_Unassigned.965
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YB
Protein Properties Length: 167aa    MW: 18069 Da    PI: 7.4396
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_Unassigned.965genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB177.41.4e-5525120297
                                 NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatl 74 
                                           +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal+tl
  evm.model.AsparagusV1_Unassigned.965  25 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALSTL 97 
                                           89*********************************************************************** PP

                                 NF-YB  75 Gfedyveplkvylkkyrelegek 97 
                                           Gf+dyvep++ yl+kyre+eg++
  evm.model.AsparagusV1_Unassigned.965  98 GFDDYVEPMRRYLQKYRETEGDR 120
                                           *********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MVSSPESNGH QRLGGDGEGS GSTIKEQDRL LPIANVGRIM KQILPPNAKI SKEAKETMQE  60
CVSEFISFVT GEASDKCHKE KRKTVNGDDI CWALSTLGFD DYVEPMRRYL QKYRETEGDR  120
AAAAGASGGH LGRGGNSSDD RANQPNSGPL MFNALDRNTG SSSRRY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.13e-57NF-YB family protein