PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_Unassigned.978

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 251aa MW: 28288.3 Da PI: 8.0624

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_Unassigned.978	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.1	8.6e-10	114	158	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr+RR+r+ ++++ L ++lP + K +K +i++ A Y+k+L evm.model.AsparagusV1_Unassigned.978 114 HMMRERQRRERLSQSYADLHSMLPYR-----SKGDKNSIVQSAALYVKEL 158 889********************8.....6999999********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MDLFSPSSSP PQQEMCPWDF SPELLDFIGA SSDVLSPLSE YSGILSPLSE QPSAVPRSAF 60 VSYTRPEFHD SSDFLSSQAN KKKNIHLRMI DLLRRIPRDR LEARTGEYSP GFRHMMRERQ 120 RRERLSQSYA DLHSMLPYRS KGDKNSIVQS AALYVKELKG VKEELLKRNE ELRIKSVENS 180 SLGGEKIKIR LDPASTLDSM IGALQCLKSM DAKARAIQTE FSGNELMAII NIESKVGSNE 240 LERALMETCR *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	124	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	7e-15	bHLH family protein